Comments (1)
related: would be cool if the nii encoding conversion can be done by the script (or a separate library, if there is a need as such)
@xgui3783 You can already do this by setting the data_type
attribute in info_fullres.json
(or even directly in info
). The volume-to-precomputed
converter will convert the data type on the fly, trying to be smart (i.e. it will perform rounding and clamping of the values to the output range).
from neuroglancer-scripts.
Related Issues (16)
- UnboundLocalError: local variable 'triangles' referenced before assignment HOT 1
- Off-by-one when converting Nifti with scaling to integer data_type HOT 1
- flat files not created with '--flat' option using slices-to-precomputed command HOT 2
- uint64 TIFF files not loading (scikit-image loader only supports strings as input not Path objects)
- tqdm causes slices-to-precomputed to fail HOT 2
- pypi version has bug HOT 1
- get_accessor_for_url doesn't recognize Windows filesystem paths HOT 1
- [feature request] support RGB24 in nifti and multichanneled tiff (RGB) HOT 1
- Not enough memory HOT 1
- Apache config HOT 17
- RGB nifti does not work with `volume-to-precomputed-pyramid` out of the box
- [bug] RGB nifti encoding standard unclear
- Support for chunking dataset in memory HOT 2
- [feature request ?] dropping support for py3.5 (ideally also py3.6 and py3.7) HOT 2
- [feature request] neuroglancer http accessor profiler HOT 2
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