Fail to run scde.error.models using example dataset about scde HOT 3 CLOSED

Solved following #40
@jean, I suggest updating the following scde link with the latest stable package
http://hms-dbmi.github.io/scde/package.html

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Hi,

I get the same problem as @biowilliam. I have installed and tried scde_1.99.1 from homepage, scde_2.12.0, or scde-2.14 from Bioconductor on R-3.6.0 I was running "diffexp.Rmd" codes. But scde.error.models got the same error. Please see below. Could you give any recommendation?

###############################################################
o.ifm <- scde.error.models(counts = cd, groups = sg, n.cores = 1, threshold.segmentation = TRUE, save.crossfit.plots = FALSE, save.model.plots = FALSE, verbose = 1)

ERROR encountered in building a model for cell MEF_66 - skipping the cell. Error:
Error in FUN(X[[i]], ...) :
trying to get slot "logLik" from an object of a basic class ("function") with no slots

ERROR encountered in building a model for cell MEF_67 - skipping the cell. Error:
Error in FUN(X[[i]], ...) :
trying to get slot "logLik" from an object of a basic class ("function") with no slots

ERROR encountered in building a model for cell MEF_68 - skipping the cell. Error:
Error in FUN(X[[i]], ...) :
trying to get slot "logLik" from an object of a basic class ("function") with no slots

ERROR fitting of 20 out of 20 cells resulted in errors reporting remaining 0 cells

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I tried to download an old version scde_1.2.1 and installed. Now, scde.error.models is working. It is strange that newer version doesn't work. When you have time, please give me your help. Thank you!

Sanghoon

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