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Hi there, I'm Dr Hugo MacDermott-Opeskin! šŸ‘‹

I'm a research software engineer working at the interface of molecular simulation, biophysics, and high performance computing.

  • šŸ˜„ Pronouns: he/him.
  • šŸ“« How to reach me: send me a message on Twitter.
  • šŸ”­ Iā€™m currently working on a bunch of cool stuff with the Chodera lab, ASAP Discovery, and MDAnalysis teams!

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Hugo MacDermott-Opeskin's Projects

alchemiscale icon alchemiscale

protein-ligand alchemical free energy calculations via Folding@Home

alchemistry_lab icon alchemistry_lab

Free energy of solvation of toluene computational alchemistry practical lab

cbang icon cbang

C! (cbang) is a library of cross-platform C++ utilities.

cmake-modules icon cmake-modules

Additional CMake functionality. Most of the modules are from Ryan Pavlik (https://github.com/rpavlik/cmake-modules)

dask icon dask

Parallel computing with task scheduling

dgl icon dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

distopia icon distopia

trying out SSE instructions for faster distance calculations

distopia2 icon distopia2

Faster distance calculations for the year 2022

drug-gym icon drug-gym

Reinforcement learning environments for drug discovery

epithelial_membrane icon epithelial_membrane

Supplementary data files for "A Computational Model Replicating the Lipid Composition of a Human Epithelial Plasma Membrane "

gufe icon gufe

grand unified free energy by OpenFE

highway icon highway

Performance-portable, length-agnostic SIMD with runtime dispatch

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