Jaeyoung Chun's Projects
10,000-ft Overview of SEQC
10,000-ft Overview of Unit Testing
AngularJS 1.5 boilerplate
Presentation on Application Portability through Singularity
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
ArchR to AnnData
CL python script to reformat CITEATAC fastqs for kite (kallisto | bustools) processing
A curated list of awesome deep learning applications in the field of computational biology
AWS CodeDeploy
Test Apache HTTP Server vhost on AWS
Run RStudio Server on AWS
Basic filtering scripts for various mutation calling tools
빅데이터종합설계 샌드박스
빅데이터 종합설계
Big Mac Kiosk Demo
Building custom reference package for Cell Ranger ATAC and ARC
Building a Cell-Ranger-compatible pre-mRNA reference package for snRNA-seq
Check FASTA file validity for SEQC Transgenes
Check whether a merged FASTQ file generated by SEQC is correct or not.
A tool that allows to get UMI counts from a single cell protein assay
This simulates cell lineage using eSTGt, reconstructs the lineage tree based on the mutation table generated by the simulation, and finally outputs various comparison metrics between the simulation and reconstruction.
Modular bioinformatics pipelines for the CMO
Compute AWS S3 ETag for big files
Cromwell Output Transfer
Setting up Cromwell + AWS GWF (Genomics Workflows)
Using CrossBrowserTesting.com API