Bin Z. He's Projects
My first Ph.D. project, as an example of how NOT to organize your computational analysis folder
collaboration with Yong on the GenTree project
Bioinformatics course for U of Iowa Undergraduates (BIOL:4213)
course repo for 2019 Bioinformatics (BIOL:4213)
2020 BIOL:4386 Introduction to Scientific Computing
course website for molecular evolution
BIOL:4213 Bioinformatics course repository, University of Iowa, Department of Biology
BIOL:4386 2021 Spring
GRE lab summer coding workshop
2023 Summer Coding Workshop on clustering
teaching pop gen at Shanghai Jiaotong University, 2024 spring
Summer Scientific Coding Workshop (SciCoW) edition 2024
estimate the divergence time between sensu stricto species
Course website for BIOL:4213 Bioinformatics at University of Iowa
bedford lab research
C Glabrata Data
Projects for peer-review, part of Coursera's EDA course (https://www.coursera.org/learn/exploratory-data-analysis)
pilot 4 species RNAseq time course for Pi starvation, in Klactis, Scerevisiae, Cglabrata and Calbicans
code to reproduce Figure 3, 4 and 5 in the paper
Course site for Introduction to Scientific Computing for Biologists
research documents for the PHO evolution project, which extends from the 2017 eLife publication
stores various code
This is a collaborative project with Dennis Wykoff group at Villinova U
Collaboration with Yong
setup for some of my favorite applications