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2016_spatio-temporal_models

FSH 507 "Spatio-temporal models for ecologists" in Spring quarter 2016 at University of Washington

admbsecr

Analysis of spatially explicit capture-recapture (SECR) data in AD Model Builder and R

bayesianmixingmodel

Code and data to run a Bayesian stable isotope mixing model for food web analysis. From Solomon et al. 2011 Ecology

blmeco

:exclamation: This is a read-only mirror of the CRAN R package repository. blmeco — Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"

books-solutions

Contains my book solutions for some of the books I've read :books:

bpca

Bayesian Principal Components Analysis (bPCA)

demo

Demo for GEO 503 - Spatial Environmental Data Analysis with R

dspat

R package for spatial analysis of distance sampling data

esda_tool

The creation of an exploratory spatial data analysis tool in Google Earth with R.

fennec

Functional Exploration of Natural Networks and Ecological Communities

fishdynr

R package of fisheries science related population dynamics models

fisheries_r

fishmethods

:exclamation: This is a read-only mirror of the CRAN R package repository. fishmethods — Fishery Science Methods and Models in R

fishmove

:exclamation: This is a read-only mirror of the CRAN R package repository. fishmove — Prediction of Fish Movement Parameters. Homepage: http://dx.doi.org/10.1111/faf.12028

fishstats

flcore

Core package of FLR, fisheries modelling in R

gap-statistic

An implementation of the gap statistic algorithm to compute the number of clusters in a set of numerical data.

geneclust

Simulation and analysis of spatial structure of population

geogen

My first R package! Functions related to spatial analysis and ecological/genetic data.

geomorph

Geomorph is a software package for performing all stages of geometric morphometric shape analysis of landmark points and curves in 2-and-3-dimensions as well as 3D surfaces in the R statistical computing environment. This repository is dedicated to providing stable and beta versions between CRAN uploads

gradmcmc

Faster estimation of Bayesian models in ecology using Hamiltonian Monte Carlo

gstudio

Analyses and functions related to the spatial analysis of

intro-r-spatial-analysis

Material for 1 day Introductory Course on Using R (& RStudio) for Spatial Analysis

latex-szu

lm-glm-glmm-intro

An introduction to Linear, Generalized, and Mixed/Multilevel models with R

mapshaper

Tools for editing Shapefile, GeoJSON and TopoJSON files

mapstutorial

markdown-here

Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

maxent

Maximum Entropy Modeling Toolkit for Python and C++

meps-analysis

Analyses for the paper "A spatially-explicit model of wintering common loons: conservation implications"