Comments (2)
ankitvgupta
commented on May 28, 2024
It looks like on this line, you check if the custom layer norm op is installed. if so, this param is set to true. Following the call stack, that sets this param in the Flash-Attention package. That implementation here has moved to a Triton implementation.
However, later in the original hyena-DNA code, we are using the non-Triton function. Does that need to be swapped out?
relevant PR: Dao-AILab/flash-attention@abbc131
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ankitvgupta
commented on May 28, 2024
In case the answer is yes, think this should do it: #58
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Related Issues (20)
- Pretraining runtimes from the paper HOT 1
- hyenaDNA for regression? HOT 1
- How to define which dataset to use in command?
- The tokenizer's bug in Huggingface HOT 1
- Predicting probability vectors of equal length to input sequence
- How to recreate the result of DNABERT in paper HOT 1
- How to convert the batch cell from the GenomicBenchmarks data to user data? CUDA memory overload if running "Single example" cell multiple times to produce embeddings.
- How to pre-train on custom dataset using hyena-dna
- Reproducing the HyenaDNA results on NT Benchmarks
- Running with standard Huggingface config and trainer files does not give optimal results
- The default for pretrained_model_path in config files is a personal directory
- Bugs when I try to access the embeddings HOT 3
- Question: How to generate DNA sequence or sequence embeddings based on own bed file
- How can I access the dataset--genomic_benchmark I got timeout issue
- Failure to reproduce the hyenaDNA reported results on NT tasks. HURRY! HURRY HURRY
- Symbol lookup error
- Error when Resuming pre-training
- Training loss becomes NAN during pretraining
- Questions about pre-training with multiple sequences HOT 1
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