haplokit Goto Github PK
Name: HaploKit
Type: User
Bio: Haplotype-aware analysis toolkit for long-read sequencing data
Location: Germany
Name: HaploKit
Type: User
Bio: Haplotype-aware analysis toolkit for long-read sequencing data
Location: Germany
Conda recipes for the bioconda channel.
CrossHyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NGS and 3rd generation sequencing to rapidly and accurately assemble highly complex metagenomic sequencing data.
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Predicting the prevalence of complex genetic diseases from individual genotype profiles using capsule networks
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Hybrid error correction approach for long reads using overlap graph
HyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NGS and 3rd generation sequencing to rapidly and accurately assemble highly complex metagenomic sequencing data.
Enhancing long read based strain-aware metagenome assembly
Haplotype aware de novo assembly of diploid genome from long reads
Full-length de novo viral haplotype reconstruction from noisy long reads
StrainXpress is a de novo assembly method which base on overlap-layout-consensus (OLC) paradigm and can fast and accurately assemble high complexity metagenome sequencing data at strain resolution.
Correcting errors in noisy long reads using variation graphs
Read-based phasing of genomic variants, also called haplotype assembly
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