haixinliuneuro Goto Github PK

allenccf

Tools to work with Allen Inst CCF data in matlab

ap_scripts_komiyamalab

Scripts written in Takaki Komiyama's lab

bpod_r05

Bpod package version 0.5

cv_proj

dannce

data-science-for-beginners

10 Weeks, 20 Lessons, Data Science for All!

decompose_submovements

Code for extracting minimum-jerk and log-normal kinematic submovements from movement data

deeplabcut

Markerless pose estimation of user-defined features with deep learning for all animals, including humans

deeplabcut-openfieldarena

A Deeplabcut network trained to label mice in open field arena with topdown view

dlc_postgui

MATLAB GUI for inspecting DLC result with movie and make adjustment

dlcanalyzer

R Scripts to analyze deep lab cut point data and related data

dpca

An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)

ephys_lfp

Haixin's MATLAB script for analyzing LFP recorded with OpenEphys Rig

functions_frommatlabcentral

handy functions from MALLAB file exchange

haixinliuneuro.github.io

website

hl_dlcutil

functions to generate/read files for deeplabcut

kilosort

GPU code for spike sorting

mask-rcnn-matlab

Mask-RCNN training and prediction in MATLAB for Instance Segmentation

matgpt

MATLAB app and class to access ChatGPT API from OpenAI

matlab-tools

A collection of useful MATLAB libraries

matlab_maskrcnn_cellfinder

train a Mask R CNN model to do cell instance segmentation

neuromatch-compneuro-2022-project

Files for the NMA 2022 behavior project

nma_learning

for me to run NMA tutorial pages

npy-matlab

Experimental code to read/write NumPy .NPY files in MATLAB

personal-website

Repo for learning how to make websites with Jekyll and GitHub Pages

photometry

Haixin's function to work with Tritsch Lab Photometry pipelines

phy

phy: interactive visualization and manual spike sorting of large-scale ephys data

phylib

Lightweight electrophysiological data analysis library

psychofit

A module for fitting 2AFC psychometric data

pythondatasciencehandbook

Python Data Science Handbook: full text in Jupyter Notebooks