Comments (1)
you can split the protein into the domains and give each domain a separate chain ID. You should However take into account that the numbers produced might not be as reliable if those interfaces differ significantly from the interfaces prodigy was trained with. Also please use the forum (https://ask.bioexcel.eu/c/prodigy/) instead of issues to post questions
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Related Issues (14)
- ValueError: invalid literal for int() with base 10 at int(struct.residueNumber(idx)) HOT 9
- ValueError: Unsupported non-standard amino acid found: DC in parsers.py HOT 2
- Silent failure HOT 3
- The option with --pymol_selection produce no output HOT 1
- Dataset at http://bmm.crick.ac.uk/~bmmadmin/Affinity not available anymore. HOT 2
- prodigy: error: unrecognized arguments: model.pdb HOT 5
- Code does not accept any spaces or "-" in the file name HOT 1
- Unable to install by pip HOT 2
- Improve `Radius array is <= 0 for the residue: ILE ,atom: CD` error message HOT 1
- Result Interpretation HOT 1
- Contact_list flag HOT 4
- --acc-threshold range? HOT 1
- Prodigy v2.1.4 and v2.1.5 appear as v2.1.3 HOT 2
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