gustaveroussy Goto Github PK
Name: Gustave Roussy
Type: Organization
Bio: Gustave Roussy
Location: paris, Villejuif
Name: Gustave Roussy
Type: Organization
Bio: Gustave Roussy
Location: paris, Villejuif
analysis pipeline for cancer whole genome
apt-copynumber-cyto-ssa v2.11.7
Affymetrix CytoScan (750k / HD) processing using apt-copynumber-cyto-ssa (2.4.0)
Affymetrix OncoScan / OncoScan_CNV processing using apt-copynumber-onco-ssa (2.4.0)
Affymetrix GenomeWideSNP_6 processing using apt-copynumber-workflow (1.20.0)
Long-reads Bulk DNA-seq pipeline
This pipeline uses SPRINT and RNAEditingIndexer to identify editing event from RNA-seq
cBioPortal related stuff
R package using ICA based method for spatial transcriptomics analysis (Visium/Slide-seq/CosMX/MERSCOPE)
Supports de cours Gustave Roussy
A deep-learning framework for multi-omics integration
Public repository supporting the paper of the DAISY study.
Easy Copy Number !
A dataset package that contains cached information for genome, chromosomes and genomic annotations, to be used with EaCoN / EaCoNiC.
Easy Copy Number, in Cohort !
Convert icgc data to common bioinformatics format
Repository with the contents for the coding exercices and the lectures of module 11 of ISFBM university diploma.
Code support all the analyses and figures for the MetaPRISM paper.
MultiQC plugin replicating the most used plots and tables from Illumina's SAV
Implementation guide - SOs
Code associated to the publication : "Immune infiltrate and tumor microenvironment transcriptional programs stratify pediatric osteosarcoma into prognostic groups at diagnosis"
Simple variant caller - Please update to the latest version !
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.