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asattools avatar asattools commented on May 30, 2024 1

Yes, thanks a lot to you and your collaborators.

Regards,
Vikas

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grburgess avatar grburgess commented on May 30, 2024

Hi,

This sounds like a issue with your python setup. I'm not sure if I can help without more information.

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asattools avatar asattools commented on May 30, 2024

Hi,

Thanks for your reply.

I have installed fermitools successfully which is the latest python 3.7 edition. Then, I also installed threeML succesfully and it's working fine. Since astromodels was also installed in this process, it seems that pynchrotron is demanding for a version of pytables which is different than astromodels.

The detailed output while trying with directly downloading from the git and also pip install are as follows

(base) grbphysics@x86_64-apple-darwin13 pynchrotron-master % pip install pynchrotron Requirement already satisfied: pynchrotron in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages/pynchrotron-0+unknown-py3.7.egg (0+unknown)
Requirement already satisfied: numba in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (0.51.2)
Requirement already satisfied: numpy in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (1.19.2)
Requirement already satisfied: astromodels in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (2.0.0)
Requirement already satisfied: llvmlite<0.35,>=0.34.0.dev0 in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from numba->pynchrotron) (0.34.0)
Requirement already satisfied: setuptools in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from numba->pynchrotron) (49.6.0.post20201009)
Requirement already satisfied: pandas in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (1.1.3)
Requirement already satisfied: PyYAML>=5.1 in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (5.3.1)
Requirement already satisfied: interpolation in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (2.1.6)
ERROR: Could not find a version that satisfies the requirement pytables (from astromodels->pynchrotron) (from versions: none)
ERROR: No matching distribution found for pytables (from astromodels->pynchrotron)

(base) grbphysics@x86_64-apple-darwin13 pynchrotron-master % conda activate threeML
(threeML) grbphysics@x86_64-apple-darwin13 pynchrotron-master % pip install pynchrotron
Requirement already satisfied: pynchrotron in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages/pynchrotron-0+unknown-py3.7.egg (0+unknown)
Requirement already satisfied: numba in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (0.51.2)
Requirement already satisfied: numpy in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (1.19.2)
Requirement already satisfied: astromodels in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (2.0.0)
Requirement already satisfied: setuptools in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from numba->pynchrotron) (49.6.0.post20201009)
Requirement already satisfied: llvmlite<0.35,>=0.34.0.dev0 in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from numba->pynchrotron) (0.34.0)
Requirement already satisfied: h5py in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (2.10.0)
ERROR: Could not find a version that satisfies the requirement pytables (from astromodels->pynchrotron) (from versions: none)
ERROR: No matching distribution found for pytables (from astromodels->pynchrotron)
(threeML) grbphysics@x86_64-apple-darwin13 pynchrotron-master %

(threeML) grbphysics@x86_64-apple-darwin13 pynchrotron-master % conda deactivate
(base) grbphysics@x86_64-apple-darwin13 pynchrotron-master % conda deactivate
grbphysics@x86_64-apple-darwin13 pynchrotron-master % pip install pynchrotron
Requirement already satisfied: pynchrotron in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages/pynchrotron-0+unknown-py3.7.egg (0+unknown)
Requirement already satisfied: numba in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (0.51.2)
Requirement already satisfied: numpy in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (1.19.2)
Requirement already satisfied: astromodels in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from pynchrotron) (2.0.0)
Requirement already satisfied: llvmlite<0.35,>=0.34.0.dev0 in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from numba->pynchrotron) (0.34.0)
Requirement already satisfied: setuptools in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from numba->pynchrotron) (49.6.0.post20201009)
Requirement already satisfied: scipy>=0.14 in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (1.3.1)
Requirement already satisfied: future in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (0.18.2)
Requirement already satisfied: interpolation in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (2.1.6)
Requirement already satisfied: pandas in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (1.1.3)
Requirement already satisfied: dill in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (0.3.2)
Requirement already satisfied: PyYAML>=5.1 in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (5.3.1)
Requirement already satisfied: astropy>=1.2 in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (3.2.3)
Requirement already satisfied: h5py in /Users/grbphysics/anaconda3/envs/threeML/lib/python3.7/site-packages (from astromodels->pynchrotron) (2.10.0)
ERROR: Could not find a version that satisfies the requirement pytables (from astromodels->pynchrotron) (from versions: none)
ERROR: No matching distribution found for pytables (from astromodels->pynchrotron)
grbphysics@x86_64-apple-darwin13 pynchrotron-master %

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grburgess avatar grburgess commented on May 30, 2024

It seems that the issue is with astromodels itself as this code does not need pytables. You should raise an issue there first. I will investigate it.

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asattools avatar asattools commented on May 30, 2024

Done.

Thanks.

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grburgess avatar grburgess commented on May 30, 2024

manually installing astromodels should fix the issue until the change is merged into the pypi repo.

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grburgess avatar grburgess commented on May 30, 2024

@asattools The new version of astromodels is out and the installation should be fine. Please let me know if this solves the problem

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