gputzel Goto Github PK
Name: Greg Putzel
Type: User
Location: New York, NY
Blog: http://gputzel.github.io
Name: Greg Putzel
Type: User
Location: New York, NY
Blog: http://gputzel.github.io
Snakemake-based workflow for (post-OTU-clustering) analysis of amplicon sequencing data
Implementation in Python of the cryptogram decoder described in Persi Diaconis' "The Markov Chain Monte Carlo Revolution"
Snakemake workflow to find 16S amplicons in bacterial genomes
Snakemake-based workflow: search for reads of fungal origin in host RNAseq data
Various useful R functions
Greg Putzel's personal website
JavaScript demonstration of cryptogram decoder using Markov Chain Monte Carlo
Snakemake-based workflow for generating synthetic shotgun metagenomics data
Scripts for getting FASTQ files from Pubshare and running them through Qiime2
Python scripts and Snakemake workflow for freezing rate analysis (behavioral scoring).
Snakemake-based workflow for RNAseq analysis using DESeq2
Snakemake-based workflow for scRNAseq analysis using Seurat
Functions related to the union-closed subset problem
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