Comments (4)
Hi @maxveliaminov , could you please share your blueprint (exclude any sensitive information)?
from hpc-toolkit.
Hi @mr0re1 here is one,
blueprint_name: palm-model
vars:
project_id: <PROJECT_ID>
deployment_name: <PROJECT_ID>
region: <REGION>
zone: <ZONE>
machine_type: <MACHINE_TYPE>
node_count_dynamic_max: <NODE_COUNT_DYNAMIC_MAX>
slurm_cluster_name: palm1
disable_public_ips: true
enable_shielded_vm: true
deployment_groups:
- group: primary
modules:
- id: network1
source: modules/network/vpc
kind: terraform
- id: appsfs
source: community/modules/file-system/nfs-server
kind: terraform
use:
- network1
settings:
machine_type: n2-standard-2
auto_delete_disk: true
local_mounts: ['/apps']
- id: spack
source: community/modules/scripts/spack-install
settings:
install_dir: /apps/spack
spack_url: https://github.com/spack/spack
spack_ref: v0.19.1
log_file: /apps/spack.log
spack_cache_url:
- mirror_name: <SPACK_CACHE_NAME>
mirror_url: <SPACK_CACHE_URL>
configs:
- type: file
scope: defaults
content: |
modules:
default:
tcl:
hash_length: 0
all:
conflict:
- '{name}'
projections:
all: '{name}/{version}-{compiler.name}-{compiler.version}'
compilers:
- [email protected]%[email protected] target=x86_64
environments:
- name: palm
content: |
spack:
definitions:
- compilers:
- [email protected]
- mpis:
- [email protected]
- python:
- [email protected]
- python_packages:
- [email protected]
- [email protected]
- [email protected]
- [email protected]
- packages:
- [email protected]
- [email protected]
- [email protected]
- [email protected]
- [email protected]
- mpi_packages:
- [email protected]
- [email protected]
- [email protected]
- [email protected]
specs:
- matrix:
- - $packages
- - $%compilers
- matrix:
- - $python
- - $%compilers
- matrix:
- - $python_packages
- - $%compilers
- - $^python
- matrix:
- - $mpis
- - $%compilers
- matrix:
- - $mpi_packages
- - $%compilers
- - $^mpis
- id: spack_startup
source: modules/scripts/startup-script
kind: terraform
use:
- network1
settings:
runners:
- $(appsfs.mount_runner)
- $(spack.install_spack_deps_runner)
- $(spack.install_spack_runner)
- type: data
destination: /apps/palm/palm-install.yaml
content: |
123
- type: data
destination: /apps/spack/activate-palm-env.sh
content: |
456
- type: data
destination: /apps/palm/palm-install.sh
content: |
789
- type: shell
content: sudo chmod -R 777 /apps
destination: chmod-apps-dir.sh
- type: shell
content: 'shutdown -h now'
destination: shutdown.sh
- id: spack_builder
source: modules/compute/vm-instance
kind: terraform
use:
- network1
- appsfs
- spack_startup
settings:
name_prefix: spack-builder
- id: homefs
source: community/modules/file-system/nfs-server
kind: terraform
use:
- network1
settings:
machine_type: n2-standard-2
auto_delete_disk: true
local_mounts: ['/home']
- id: debug_node_group
source: community/modules/compute/schedmd-slurm-gcp-v5-node-group
use:
- network1
- homefs
- appsfs
settings:
node_count_dynamic_max: <DEBUG_MAX_NODE_COUNT>
- source: community/modules/compute/schedmd-slurm-gcp-v5-partition
kind: terraform
id: debug_partition
use:
- network1
- homefs
- appsfs
- debug_node_group
settings:
is_default: true
enable_shielded_vm: null
machine_type: null
node_count_dynamic_max: null
partition_name: debug
- id: compute_node_group
source: community/modules/compute/schedmd-slurm-gcp-v5-node-group
use:
- network1
- homefs
- appsfs
- source: community/modules/compute/schedmd-slurm-gcp-v5-partition
kind: terraform
id: compute_partition
use:
- network1
- homefs
- appsfs
- compute_node_group
settings:
enable_shielded_vm: null
machine_type: null
node_count_dynamic_max: null
partition_name: compute
- source: community/modules/scheduler/schedmd-slurm-gcp-v5-controller
kind: terraform
id: slurm_controller
use:
- network1
- debug_partition
- compute_partition
- homefs
- appsfs
settings:
machine_type: n2-standard-8
- source: community/modules/scheduler/schedmd-slurm-gcp-v5-login
kind: terraform
id: slurm_login
use:
- network1
- homefs
- appsfs
- slurm_controller
settings:
machine_type: n2-standard-8
disable_login_public_ips: true
from hpc-toolkit.
@maxveliaminov , we found a root cause, working on the fix, expect it to be fixed in develop
early next week.
from hpc-toolkit.
@maxveliaminov, #1406 contains a fix for this problem. Could you please build ghpc
from develop
branch and confirm if it fixes your problem? Please re-open the issue if needed.
from hpc-toolkit.
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