gjhanchem Goto Github PK

2018-june-rna-seq-workshop

2019_caicedo_cytometrya

Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images

adnet

Repository for the analysis of the paper "Influence of node abundance on signaling network state and dynamics analyzed by mass cytometry"

arcashla

Fast and accurate in silico inference of HLA genotypes from RNA-seq

artms

Analytical R Tools for Mass Spectrometry

asap

Program for the analysis and visualization of whole-slide images in digital pathology

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

bead-normalization

bead-based normalization of mass cytometry data

benchmarks

A benchmark framework for Tensorflow

camelyon16

Evaluation code for CAMELYON16 challenge.

citrus

Citrus Development Code

codex

Image processing software for CODEX: driftcompensation, deconvolution, uploading and segmentation

complete-python-3-bootcamp

Course Files for Complete Python 3 Bootcamp Course on Udemy

complexheatmap

Make Complex Heatmaps

cyt3

Matlab GUI for analysis of mass cytometry data

cytobackbone

CytoBackBone: an R package for merging of phenotype information from different cytometric profiles

cytocompare

CytoCompare: an R Package for Computational Comparisons of Cytometry Profiles.

cytof-backer-upper

Script for backing up CyTOF data to Google cloud storage

cytofcore

R package for working with CyToF data

cytofmerge

Merging of two CyTOF datasets with shared markers

cytokit

Microscopy Image Cytometry Toolkit

cytomap

A package in python and R developed to link CyTOF and RNAseq datasets

deep-learning-models

Keras code and weights files for popular deep learning models.

deep-learning-with-python-notebooks

Jupyter notebooks for the code samples of the book "Deep Learning with Python"

deepimagej-plugin

The ImageJ plugin to run deep-learning models

deepprofiler

Morphological profiling using deep learning

devclassifier

The Developmental Classifier was made to assign cells of unknown origin to their closest defined population.

diffcyt

R package for differential discovery analyses in high-dimensional cytometry data

dplyr

dplyr: A grammar of data manipulation

enhancedvolcano

Publication-ready volcano plots with enhanced colouring and labeling