ginkgobioworks Goto Github PK

arvados

an open source platform for managing and analyzing biomedical big data

calibrate

Create and use linear- and power-regression based calibration curves

celery

Distributed Task Queue (development branch)

cromulent

Docker-compose build system for Arvados

curious

Graph-based data exploration tool

curious-js

JavaScript consumer code for Curious APIs.

docker-registry-client

A Python REST client for the Docker Registry

edge

Efficiently keep track of changes to genomes

fluoride

Automating the creation of microservices in AWS!

geckopy

Enzyme-constrained genome-scale models in python

giraffe-ui

Javascript visualization of features on a sequence

grafana-logstream

graphene-django-extras

Extras functionalities for Graphene-Django

igv.js

Embeddable genomic visualization component based on the Integrative Genomics Viewer

jcamp

A set of Python utilities for reading JCAMP-DX files.

ontology-clean

Clean and organize metadata with ontologies

plotly-plot

Polymer element for the plotly.js library

pychemy

Python helpers for handling chemical formulas.

pymzml

pymzML - an interface between Python and mzML Mass spectrometry Files

pypiserver

Minimal PyPI server for uploading & downloading packages with pip/easy_install

react-curious

React data container for curious-js

react-json-schema-form-builder

Visual editor for forms based on json schema, built in React JS

regression-js

A javascript library containing a collection of least squares fitting methods

sailfish

Rapid Mapping-based Isoform Quantification from RNA-Seq Reads

sars-cov-2-synthesis

Ginkgo SARS-CoV-2 synthesis efforts: overviews and data

scatter-matrix

Explore data matrix using scatterplot matrix

seqviz

DNA sequence viewer supporting custom, GenBank, FASTA, NCBI accession, and iGEM input.

shepard

Automating the creation of batch processing workflows in AWS!

spserver

Node static page server for quickly getting MVVM running

trinityrnaseq

Trinity RNA-Seq de novo transcriptome assembly