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JT Guo's Projects

awesome-r icon awesome-r

A curated list of awesome R packages, frameworks and software.

biocstickers icon biocstickers

Stickers for some Bioconductor packages - feel free to contribute and/or modify.

ccgaa_scrapy icon ccgaa_scrapy

A spider for extracting the genetic ancestry of cell lines from http://52.25.87.215/CCGAA

chatgpt-next-web icon chatgpt-next-web

A cross-platform ChatGPT/Gemini UI (Web / PWA / Linux / Win / MacOS). 一键拥有你自己的跨平台 ChatGPT/Gemini 应用。

data-science-ipython-notebooks icon data-science-ipython-notebooks

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.

deep-review icon deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

ensembl-vep icon ensembl-vep

The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

hicexplorer icon hicexplorer

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

ichorcna icon ichorcna

Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

intervar icon intervar

A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

jtg icon jtg

JavaScript Turtle Graphics

migwas icon migwas

A software to detect genome-wide miRNA-gene enrichment signal.

mutperiod icon mutperiod

A hybrid Python and R toolset for characterizing nucleosome mutational periodicities.

mutsignatures icon mutsignatures

Computational approaches for discovery of mutational signatures in cancer

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