Comments (2)
Turns out the processes were not picking up the correct proj version, something to do with my local installation, so closing.
from dask-geopandas.
OK, reading https://stackoverflow.com/questions/46691675/what-do-killedworker-exceptions-mean-in-dask mentioned to look at the worker logs in stdout, which reminded me that when working in a notebook, you don't see those directly but only in the terminal where you started the notebook. And indeed, that gives a more understandable error:
distributed.protocol.core - CRITICAL - Failed to deserialize
Traceback (most recent call last):
File "/home/joris/miniconda3/envs/geo-dev/lib/python3.8/site-packages/distributed/protocol/core.py", line 124, in loads
value = _deserialize(head, fs, deserializers=deserializers)
File "/home/joris/miniconda3/envs/geo-dev/lib/python3.8/site-packages/distributed/protocol/serialize.py", line 268, in deserialize
return loads(header, frames)
File "/home/joris/miniconda3/envs/geo-dev/lib/python3.8/site-packages/distributed/protocol/serialize.py", line 62, in pickle_loads
return pickle.loads(b"".join(frames))
File "/home/joris/miniconda3/envs/geo-dev/lib/python3.8/site-packages/distributed/protocol/pickle.py", line 59, in loads
return pickle.loads(x)
File "/home/joris/scipy/repos/pyproj/pyproj/crs/crs.py", line 295, in __init__
super().__init__(projstring)
File "pyproj/_crs.pyx", line 2332, in pyproj._crs._CRS.__init__
pyproj.exceptions.CRSError: Invalid projection: epsg:4326: (Internal Proj Error: proj_create: cannot build geodeticCRS 4326: SQLite error on SELECT name, ellipsoid_auth_name, ellipsoid_code, prime_meridian_auth_name, prime_meridian_code, area_of_use_auth_name, area_of_use_code, publication_date, deprecated FROM geodetic_datum WHERE auth_name = ? AND code = ?: no such column: publication_date)
distributed.core - ERROR - Invalid projection: epsg:4326: (Internal Proj Error: proj_create: cannot build geodeticCRS 4326: SQLite error on SELECT name, ellipsoid_auth_name, ellipsoid_code, prime_meridian_auth_name, prime_meridian_code, area_of_use_auth_name, area_of_use_code, publication_date, deprecated FROM geodetic_datum WHERE auth_name = ? AND code = ?: no such column: publication_date)
so something is wrong with my pyproj installation.
from dask-geopandas.
Related Issues (20)
- Drop distributed as a required dependency? HOT 2
- Question regarding parallelism over many seperate GeoSeries HOT 2
- dask geopandas to parquet does not seem to persist spatial paritions HOT 1
- Can someone answer why the number and x columns of '201105. shp' in the output of this code also become 0? HOT 1
- msgpack - ValueError: 2369781118 exceeds max_bin_len(2147483647 HOT 1
- Remove dask anti-pattern example on README and docs HOT 1
- DeprecationWarning: underlying geometries through the `.data` attribute is deprecated HOT 1
- Error when reading geoparquet file HOT 3
- Support latest dask.dataframe with query planning (dask-expr) HOT 3
- ddf._meta_nonempty doesnt instantiate correctly when calling `from_dask_dataframe` HOT 1
- BUG: `to_parquet()` failing with `dask=2024.4.1` HOT 2
- Uninformative AttributeError for aggregation methods
- AttributeError: 'DataFrame' object has no attribute 'within' HOT 9
- Can `GeoDataFrame.crs` set `None`? HOT 5
- spatial_shuffle fails when loading from a shapefile HOT 9
- `ValueError: 'left_df' should be GeoDataFrame, got <class 'tuple'>` using sjoin after `spatial_shuffle` HOT 7
- dissolve does not accept multiple columns to groupBy
- ValueError: 'left_df' should be GeoDataFrame, got <class 'tuple'> HOT 2
- spatial_shuffle fails when loading from a geopackage HOT 1
- Error when importing dask_geopandas.expr on Python 3.10 when Dask query planning is disabled HOT 7
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from dask-geopandas.