Comments (2)
Further, function should be rewritten so that the test returns the pvalue. As is, the threshold is user provided and used to construct the confidence interval for difference in group means, and just returns whether or not a gene is significant at that threshold.
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Related Issues (20)
- Version of ProjectR that can use monocle diff test coefficients to transfer 'tested' features via projection
- Add in classifier-specific features
- Some vignette notes HOT 1
- Extend visualizations
- Develop workflow(s) for spatial analysis
- Vignette for spatial projection
- Return full model fit when arg full=TRUE
- Warning on install related to removing CoGAPS dependency
- reverse dependency problem with ggalluvial HOT 3
- Issue in Vignette NMF Visualization
- To Dos HOT 1
- merge bioc and github repos
- make sure passing bioConductor checks
- Errors in projectR method for sparse matrix data HOT 3
- Build out and test a version of patternDrivers using VGAM DE testing.
- Github Pages site for ProjectR
- Polish documentation for pending bioC resub and pending v1.0 release
- Enforce independence of projections
- Bootstrap confidence in projected values HOT 1
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