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g3chen's Projects

bamqc icon bamqc

Workflow and decider to run bam-qc-metrics (https://github.com/oicr-gsi/bam-qc-metrics)

bwa icon bwa

Workflow for BWA mem

mavis icon mavis

MAVIS workflow, annotation of structural variants

rsem icon rsem

Wrapper workflow and Decider for RSEM tool (transcription analysis for RNAseq)

sequenza icon sequenza

Workflow for Sequenza, cellularity and ploidy

star icon star

Workflow for STAR RNAseq aligner

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