fsert24 Goto Github PK
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fsert24's Projects
annotables
R data package for annotating/converting Gene IDs
de_analysis
Scripts to run differential expression analysis using DESeq2 package
deconvolute_rnaseq
scripts that uses tools to deconvolute immune cells types from bulk RNA-Seq data
dsbook-part-1
Repository for Introduction to Data Science Book
geoquery-scripts
Scripts using GEOquery package to fetch expression matrices and phenotypic data associated with GSE datasets
labs
Rmd source files for the HarvardX series PH525x
multiome_analysis
Scripts for sincle cell multiome analysis
r-scripts
Miscellaneous R script to wrangle data and generate visualizations
rnaseq
rsem
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
rshiny
Working example scripts to implement small tricks in Shiny app
scrnaseq
shiny_module
Learning about Shiny Modules
survivalanalysis_kaplanmeier
Generating Kaplan Meier plots using gene expression data
training-modules
A collection of modules that are combined into 1-5 day workshops on computational topics for the childhood cancer research community.
youtubetutorials
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