fishjord Goto Github PK

2013-read-aligner

2013-xander-paper

Analysis and text for the 2013 Xander methods publication

avida_predation_scripts

Scripts developed for supporting predator runs in avida

baited_assembly_example

Example pipeline for assembly of baited sequences using De Bruijn Graphs

cloud_dns_dynamic_ip

Utility for update Google CloudDNS with a machine's "external" ip address

clustering

RDP memory-constrained hierarchical clustering tools.

d3dframestreamer

Code for streaming d3d backbuffer to a network socket

d3dmjpeg

MJpeg streaming of direct3d backbuffer (via injection)

dbg-graph-null

devnet

Development Network with input pattern classification rejection.

direct3dhook

DirectX Capture and Overlays by using Direct3D API hooks

effulgent_sakana

Machine learning utility scripts

fishjord.github.io

Mah blog

gfclassify

Tool for rapid classification of open reading frames to gene families using ICMs

glowing_sakana

Miscellaneous (mostly bioinformatics) scripts that someone somewhere may find useful

gsutil

A command line tool for interacting with cloud storage services.

ioniareader

Java J2EE web-based manga reader

irdaremote

A simple remote app for android devices equipped with an IR blaster compatible with the IRDA system service (ie: mostly samsung devices).

javaclassserver

Java network class server and class loader with a custom java command line wrapper.

khmer

in-memory k-mer counting

make_swc_quickstart

SWC teaching session 5 final exercise

presentations

Various presentation materials that don't really make sense being in their own repo

scrypt

Java implementation of scrypt

sga

de novo sequence assembler using string graphs

swc_hhmi

Materials for the SWC at HHMI May 6-7 2013

swc_msu

Software Carpentry boot camp material

temp-humidity-sense

Temperature and humidity sensing python app using circuitpython and SHT31-D sensors

wifi_survey

Android app and server for crowd-sourced wifi surveying

xander-hmmgs

Tool for gene targeted metagenomic assembly

xander_analysis_skel

Skeleton gene targeted assembly analysis pipeline