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ai-science-training-series

bioc2022allelicexpression

Bioc2022 workshop. SEESAW: Statistical Estimation Of Allelic Expression Using Salmon And Swish

bios-611-

R

buildabiocworkshop

Template for building a bioconductor workshop package using github actions

comp-bio-setup

Set up a computer for Computational Biology

compbio_src

Introduction to Computational Biology - source Rmarkdown files

course-v3

The 3rd edition of course.fast.ai

coursera-r-programming

Coursera R-Programming

fishpond

Differential transcript and gene expression. Helper functions for working with Salmon, alevin, and alevin-fry data.

intro-to-rnaseq-hpc-o2

This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster

longitudinal-vae

Python scripts for our model described in http://proceedings.mlr.press/v130/ramchandran21b.html

machinelearning

manuscript-templates

LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.

osteoblast-test

SEESAW on Osteoblast data

ot-tutorials

repository with the tutorials for MLSS Skoltech

programmingassignment2

Repository for Programming Assignment 2 for R Programming on Coursera

pytorch-vae

A Collection of Variational Autoencoders (VAE) in PyTorch.

scldaseq

An R Package for single cell paired analysis, adapted from the Structural Topic Model

statcomp_src

Statistical Computing - source Rmarkdown files