Comments (4)
fenderglass
commented on July 17, 2024
Hi,
Yes, the current implementation was designed to run on a single node. Cluster configuration is something that we consider for the future releases.
from flye.
Imoteph
commented on July 17, 2024
Thx, for answering. Do you actually know when a possible future release is to be expected ;)
from flye.
fenderglass
commented on July 17, 2024
Hard to tell, it is not a priority currently. Are you having issues with a particular dataset/configuration?
from flye.
Imoteph
commented on July 17, 2024
Not yet, I guess. I am exploring repeat aware assemblers for plant genome assembly and as I have a huge dataset I thought of an comparison internal here with canu, where I know how to scale through the cluster.
I have another comment, but I will open a new issue for that
from flye.
Related Issues (20)
- free(): invalid next size (fast) at "Simplifying the graph" HOT 4
- Assembly of complex genomes with high rate of genome rearrangements HOT 2
- Anomaly in resource usage HOT 7
- What parameter for R10.4.1 FAST mode data HOT 1
- Can't resume from a definite polishing step ? HOT 4
- flye usage HOT 1
- I am running an assembly on an ONT reads, but it was aborted HOT 1
- Flye assembler should support spaces in file paths. HOT 1
- Inferring number of elements in an assembly based on multiplicity HOT 2
- Merge dip_polish branch to mainstream HOT 3
- The question after #683 HOT 1
- minimap2 and samtools issues in running consensus stage HOT 1
- Samtools Library Issues HOT 1
- Flye reported an error HOT 4
- Is the assamble.fasta is redundant without "keep-haplotypes" HOT 1
- Correcting bubbles step crash HOT 6
- A couple of installation issues. HOT 4
- assembly error No disjointigs were assembled HOT 1
- Should I filter based on quality ONT 10.4.1 simplex reads before using --nano-hq? HOT 1
- Missing & misassembled plasmids HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from flye.