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balloonr

trials of perspective

bot

BoT (stands for Bag of Tasks) is an R package allowing to distribute independent tasks over many cores and many computing nodes.

chipseqspikeinfree

A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications

codabg

codala_bundle_py

A template for data challenges on CodaLab for HADACA project

codalab_challenges

A repository of codalab challenges

combined-pvalues

combining p-values using modified stouffer-liptak for spatially correlated results (probes)

cuter

Qui est le plus mignon ?

deeptoolsr

DeepTools binding for R

depthtool

simple calculaltion of seq properties

dmethr

DNA Methylation repression of transcriptional activity

dmprocrdata

A set of data dedicated to the dmprocr R package.

dnamaging

A set scripts and vignettes allowing to build am epigentic clock model

epimed_poster

epimeddata

A set of data dedicated to the epimedtools R package.

epimedpipelines

A set of pipeleines dedicated to omics data integration

epimedstudy

epimedtools

A package allowing multi-omics analysis using R

ewascombpr

A line that pipes epimedtools DNA methylation study to an ewas then to combp

fchuffar.github.io

Template for creating your website with R markdown.

fertility-prediction-challenge

Fertility prediction challenge

fonctionr

An empty R package to illustrate development practices in R: documentation, literate programming, testing, versioning, continuous integration.

forked_protopackage

gardenr

make R grow up tomatoes

geo_submission

A set of scripts simplifying submission of dataset to NCBI GEO data repository.

gse2study

A set of scripts to download raw data form NCBI, build an epimedtool study and more.

intro_r

An introduction to R

linear_models

A set of pedagogical documents to learn and teach linear models

logistic_models

A set of pedagogical documents to learn and teach logistic models

medepir

MEthylation DEconvoluation PIpeline in R