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bam2fastq

Parse a CCS BAM file and only emit reads over a given quality threshold

beast-mcmc

Automatically exported from code.google.com/p/beast-mcmc

benchmarks

Some benchmarks to compare C# v Java

bh

R package providing Boost Header files

bio.plink

A C# / .NET Library for working with PLINK data files.

bio.vcf

A CSharp Parser for VCF Files

bio_mitomaster

Marty Brandon's Bio::Mitomaster perl module

biopython

Official git repository for Biopython (converted from CVS)

bwa-sharp

C# Binding of the BWA MEM program, giving programmatic access and returning .NET Bio objects.

bytecount

Counting occurrences of a given byte or UTF-8 characters in a slice of memory – fast

cafe-quality

Tools to assess and diagnose accuracy issues in PacBio data

cc2r

An R package to evaluate consensus models

ccscheck

Evaluate quality, model fit, QV calibration and all else CCS

ccscheck-1

Evaluate quality, model fit, QV calibration and all else CCS

ccsviewer

Visualize data that leads to a difference from a reference sequence.

ccsviewr

R-based CCS output viewer

clr-samples

Repository for CLR Hosting and Diagnostic API native code samples.

complete-striped-smith-waterman-library

consensuscore

C++ library of multiple-sequence consensus routines with SWIG bindings

cpplog

Simple C++ logging library

curvefitter

Fit Growth Curves from Microtiter Plates

cykhash

cython wrapper for khash

dbfe

Code to infer the distribution of beneficial mutations in evolving populations

devtools

Tools to make an R developer's life easier

dotplot

Fast generation of dotplots comparing sequences in R

emcc

:exclamation: This is a read-only mirror of the CRAN R package repository. EMCC — Evolutionary Monte Carlo (EMC) Methods for Clustering

enclone

VDJ Clone Analysis Tools

exomedepth

falcon

FALCON: experimental PacBio diploid assembler

feather

Feather: fast, interoperable binary data frame storage for Python, R, and more powered by Apache Arrow