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aa2codon

A Python package for generating codon MSA file from amino acid MSA file

acpsicov

Protein Sparse Inverse COVariance analysis program for nucleotide and amino acid sequences

biosequtils

An R package containing various biological sequence analysis tools

cma

An R package for correlated mutation analysis using both codon and amino acid levels

docker-rserve

Dockerfile for build a Rserve

dupradar

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/dupRadar.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=dupRadar.

etaijacob.github.io

mapdb

An R package for mapping Pfam multiple sequence alignment (MSA in sth format) or Uniprot (MSA in fasta format) to PDB residue coordinates.

miscinr

This repository contains some code that might clear up some issues in R

old_website

Personal website

scde

Example of docker with R, scde and DESeq2

single_cell_analysis

Introduction to single-cell RNA-Seq analysis workshop

toyfold

A Software suite to perform enumeration and simulations of a simplified model (i.e. toy model) of protein structure and folding process

www_personal

Personal website