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billsacks avatar billsacks commented on June 14, 2024

Hmmmm, this seems bad. I'm having trouble reproducing the problem. Can you:

  1. Open up permissions on that cheyenne directory, adding world read permissions to everything in that directory and under it, and world execute permissions to the directory and subdirectories: From that directory:
find . -type d -exec chmod a+rx {} \;
find . -type f -exec chmod a+r {} \;
  1. Give the full output from running the checkout_externals command with -vv (for extra verbosity)

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cacraigucar avatar cacraigucar commented on June 14, 2024

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kdraeder avatar kdraeder commented on June 14, 2024

I wondered whether this could be caused by my moving this directory
from the old /glade/p/work/raeder to the new location. But I didn't
see any evidence of that path name in any of the files.
Even so, I tried a fresh checkout of CESM2 into the new location,
and it seemed to work fine. That includes substituting a fork of maint-5.6
which I have in github/kdraeder/cime:master for the default cime.
So maybe this is solved. But I'm not filled with confidence about my
ability to preserve work in this environment.

Here's the output from the old cesm2_0 checkout_externals.
The -vv didn't seem to add anything.


./manage_externals/checkout_externals -vv |& tee checkout_externals-vv.out
Processing externals description file : Externals.cfg

Processing externals description file : Externals_CLM.cfg
Processing externals description file : Externals_POP.cfg
Processing externals description file : Externals_CISM.cfg
Checking status of externals: clm, ERROR:root:subprocess call to 'git'
has exceeded timeout limit of 300 seconds.
Timout errors typically occur when svn or git requires
authentication to access a private repository. On some systems, svn
and git requests for authentication information will not be displayed
to the user. In this case, the program will appear to hang and
generate a timeout error. Ensure you can run svn and git manually and
access all repositories without entering your authentication
information.

ERROR: subprocess call to 'git' has exceeded timeout limit of 300 seconds.
Timout errors typically occur when svn or git requires
authentication to access a private repository. On some systems, svn
and git requests for authentication information will not be displayed
to the user. In this case, the program will appear to hang and
generate a timeout error. Ensure you can run svn and git manually and
access all repositories without entering your authentication
information.


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billsacks avatar billsacks commented on June 14, 2024

This seems to be a manage_externals issue. I'm going to move this to the manage_externals issue tracker and add more information there.

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billsacks avatar billsacks commented on June 14, 2024

This issue was moved to ESMCI/manage_externals#113

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