ericearl Goto Github PK

202404-seattle-maintainer-meeting

abcd-dicom2bids

For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.

analysis-nda17

Collection of scripts to analyze ABCD release data

analyticalreportexample

auto-gpt

An experimental open-source attempt to make GPT-4 fully autonomous.

auto-motion-fmriprep

Automated motion detection using fmriprep confounds

automatic-quality-control

About Implementation of "An efficient semi-supervised quality control system trained using physics-based MRI-artefact generators and adversarial training"

bids-extensions

BIDS Extension Proposal Docs

bids-phenotype

A utility repository for BIDS phenotypic data conversion, aggregation, and segregation.

bids-specification

Brain Imaging Data Structure (BIDS) Specification

bids-website

Website for the Brain Imaging Data Structure standard.

catinabox

Intro to Testing and Test Automation in Python

daic2hcp

tool for projecting preprocessed volumetric MR data from the DAIC onto HCP grayordinates

diy-documentation

A BioData Club Workshop on Markdown and Read the Docs.

dmriprep-viewer

Interactive dmriprep report HTML, JS & CSS

ericearl

Config files for my GitHub profile.

ericearl.github.io

Live GitHub Page at:

exploring_activation_functions_sin

I wanted to explore using an unconventional activation function in neural networks.

fancy_git

Collaborating and getting fancy with Git: A practical guide to some advanced features of Git version control

fancy_github

A repository to teach about some of GitHub's suite of repository-specific tools such as: Issues, Milestones, Projects, Wiki, and Discussion.

fmriprep

fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.

github-slideshow

A robot powered training repository :robot:

githubpagestutorial

Tutorial on Setting Up a Github Page

hcp2nipype-hack2015

The outcomes of the HCP to Nipype project at the OHBM Hackathon 2015.

list_diff

A simple python printing tool for taking the differences of text lists.

magic-of-markdown

Short tutorial on using Markdown for Documents, GitHub Pages and Reproducible Scripting

makerpg

MakeRPG is intended to be a system that allows anyone who can edit plain text YAML files to make automatic characters from game systems.

minimal-mistakes

:triangular_ruler: Jekyll theme for building a personal site, blog, project documentation, or portfolio.

mm-github-pages-starter

mm-github-pages-starter

my-first-rtd

A sample repository for use in the BioData Club DIY Documentation Workshop