Comments (1)
Related Issues (20)
- Docker v111.0 and. v112.0 got error bgzip not found in path HOT 3
- VEP error for structural variation VCF input HOT 8
- Missing genes on chrMT when using --refseq HOT 3
- Different cDNA length for several RefSeq transcript HOT 2
- gnomAD r4.1.0 for G2P HOT 1
- VEP v112 `ALLELE_NUM` empty in output VCF for input SV HOT 11
- --individual_zyg ind or all option triggers error. HOT 16
- CDS coordinate misalignment for some genes in VEP version 112 HOT 4
- Synonyms file does not work in the offline mode HOT 6
- Cant Install plugins HOT 4
- VEP112 predicts "inframe_insertion, stop_retained_variant" in cases where previously was predicted as "frameshift_variant, stop_gained" HOT 4
- Q: How to filter variants by a specific feature before --pick_order is applied? HOT 5
- `0` does not work as a variant identifier HOT 3
- "No cache found for homo_sapiens, version 105", but the latest version is 112 HOT 5
- issue specifiying cache dir (-d) and downloading files HOT 2
- Seeking clarity on --fields vs --custom usage HOT 4
- Request for Documentation and Containerization of Bio::EnsEMBL::XS Module for VEP to run faster. HOT 3
- filter_vep on HGNC_ID HOT 5
- SpliceAI plugin update please HOT 1
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from ensembl-vep.