eLife Sciences's Projects
Associated scripts from "Neutrophils promote CXCR3-dependent itch in the development of atopic dermatitis" posted to biorxiv on 2019/5/31
Supplemental Code for Forcier et al., 2018
This is the analysis code from de Gee JW, Colizoli O, Kloosterman NA, Knapen T, Nieuwenhuis S & Donner TH. 2017. Dynamic modulation of decision biases by brainstem arousal systems. eLife.
Scripts submitted as part of Solanaceae acylsugar manuscript
Ribosome profiling pipeline for bacterial samples created by Fuad Mohammad.
Pipeline for Sox2 transcription analysis using MS2 fluorescence
Urai AE, de Gee JW, Tsetsos K, Donner TH (2018) Choice history biases subsequent evidence accumulation. bioRxiv:251595.
Analysis code for 2018 split paper
Decoupling sensory from decisional choice biases in perceptual decision making (published in eLife)
This repository supports Witt, Benjamin, Svetec and Zhao 2019
Codes for ribosome profiling study of SD-ASD interaction
This repository contains Matlab based scripts and functions design to study object-based co-localization of 2 color dSTORM images. The program is based on Manders and overlap coefficients estimation between two sets of objects. It can be also used to evaluate univariate and bivariate spatial statistics functions for the sets of clusters and compare it to randomized set. This files are all beta versions and the database will be shortly updated.
Matlab code generates retino- and cortico-collicular mapping sequentilly based on correlated neuronal activity and EphA/ephrin-As gradients
3Cs