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candida_network_meta

cookhla

An accurate and efficient HLA imputation method.

covid19_genomicc_avt_analysis

covid_pmm

crp_extractor_annotator

cytokine.somascan

deep-hla-exp

DEEP-HLA Fork

drop_memory

Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders

drop_terra_workflow

drop_terra_workflow

hisat-genotype

hisat_genotype_qgp

hla-tapas

HLA-TAPAS pipeline for HLA association and fine-mapping studies

hla_ukb

imgthla

Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute

kharmj_darmj

Du code de projet passés qui pourrait redevenir utile.

locuszoom_adjusted

A slight adjustment to locuszoom to easily use whatever reference you want (no more rsids!)

meta_colocalization

Colocalization for the HLA region

non-cognitive

Code used for the GWAS-by-subtraction of non-cognitive skills and follow-up analyses

non_linear_mr

pca_projection_covid_19_hgi

snp2hla_redux

Modified version of SNP2HLA

spousepairs

Code for deriving spouse-pairs

wes.wgs

Covid-19 HGI WES/WGS burden test BQC-19 pipeline

xgboost_hla_imputation

This provides code to impute HLA alleles using an XGboost model

yacca

:exclamation: This is a read-only mirror of the CRAN R package repository. yacca — Yet Another Canonical Correlation Analysis Package