Name: Donovan H. Parks
Type: User
Company: Bioinformatic consultant
Bio: Bioinformatic consultant interested in metagenomics, human microbiota, biogeography, information visualization, and machine learning.
Twitter: donovan_parks
Location: Canada
advent-of-code
Solutions for Advent of Code
ani-cache
Cache-aware ANI calculations.
art
Generative art projects
background-subtraction-library
C++ background substraction library
biolib
Python package for common tasks in bioinformatic.
chameleon
Many visualizations of beta diversity.
communitym
Identify, classify, and assemble 16S reads in metagenomic data.
comparem
A toolbox for comparative genomics.
dbb
Bin scaffolds from a single metagenomic sample into population genomes.
dbscan
Clustering of sequences from environmental samples.
drawm
A toolkit for creating publication-quality images of phylogenetic trees.
expressbetadiversity
Taxon- and phylogenetic-based beta diversity measures.
finch-rs
A genomic minhashing implementation in Rust
fragmentclassificationpackage
Homology- and composition-based classifiers for assigning a taxonomic attribution to metagenomic fragments.
genetreetk
A toolbox for working with gene trees.
genometk
A toolbox for working with genome.
genometreetk
A toolbox for working with genome trees.
linkm
Finds links between 16S reads and assembled contigs.
math-as-code
a cheat-sheet for mathematical notation in code form
ncbi_ftp
python code for bioinformatics projects
networkdiversity
Calculation of beta diversity over phylogenetic networks.
pets
Putative Evolutionary Trees
phylorank
Assign taxonomic ranks based on evolutionary divergence.
prodigal
Prodigal Gene Prediction Software
pygmy
Visualization of large trees and associated metadata
refinem
A toolbox for improving metagenome-assembled genomes.
roary
Rapid large-scale prokaryote pan genome analysis
sketchm
Fast genome ANI estimation using k-mer sketches.
stamp
Statistical Analysis of Metagenomic Profiles
unitem
Ensemble binning strategies for combining the output of multiple binning methods.
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
