dongyuexie Goto Github PK

bayeslogit

The R Package BayesLogit

bcart

A collection of my Bayesian tree implementations.

conquer_comparison

Code for evaluation of differential expression methods in single-cell RNA-seq data

dash

Dirichlet adaptive shrinkage for compositional data

dear

deconference

dongyuexie.github.io

My page

ebnm

R package to fit Empirical Bayes Normal Means model.

ebnmf

This R package fits empirical Bayes Non-negative Matrix Factorization model.

ebpm

R package to fit the "Empirical Bayes Poisson Means" model.

ebpmf-paper

ebpmf.alpha

Empirical Bayes Poisson Matrix Factorization

ebpmf.beta

ebtf

Empirical Bayes Trend Filtering

fastem

A few illustrations of the EM accelration method.

flashier

A faster and angrier package for EBMF. In progress.

flashr

R package for Empirical Bayes Factor Analysis.

funflash

functional EBMF

gscca

Analysis for my master thesis.

gsmash

gtex-pipeline

GTEx & TOPMed data production and analysis pipelines

jmlr-style-file

LaTeX style file for the Journal of Machine Learning Research

lrvs

Linear regression variable selection

maskedmash

https://dongyuexie.github.io/maskedmash

maskedmashr

This R package fits masked-mash model to multivariate Z scores.

mead

MEAD: Measurement Error Adjusted Deconvolution

misc

Miscellaneous collections of curiosity

mr-ash

A simple implementation of the "multiple regression adaptive shrinkage" model, with examples.

narfd

scca

An integrated R package for sparse canonical correlation analysis.