BioImage Analyst @ The Crick
Turns out I use Java a lot...
djpbarry Goto Github PK
Name: Dave Barry
Type: User
Company: @FrancisCrickInstitute
Location: London, UK
Blog: https://www.crick.ac.uk
Dave Barry's Projects
2019-embl-poster
actin-tail-model
adapt
FIJI Plugin for quantification of cell migration, protrusions, and fluorescence intensities
adaptdataprocessing
adolase_spot_quant
anamorf
FIJI Plugin for automated analysis of filamentous structures
batch_3d_nuclear_segmentation
FIJI script for naive segmentation in 3D
bioimagearchiveprep
calm
A selection of FIJI plugins developed at Crick Advanced Light Microscopy
calm-scripts
A selection of FIJI scripts for various tasks originating from Crick Advanced Light Microscopy
cellprofilertrackinganalysis
Simple script to align trajectories output from CellProfiler
colocalisation_workshop
cuda-gauss-tracker
daim-mmc2023
Repository for materials associated with DAIM @ Learning Zone, MMC 2023
djpbarry
embryo-generator
fast4dreg
Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/or z-directions.
fiji-training-beginners
Materials for the 1-day Beginners workshop in Fiji
fish-quant
foldermonitor
Powershell script to monitor changes in directory and write to file
fretanalysis
giani
General Image Analysis of Nuclei-containing Images
giani-docs
giani_javadocs
gianidatawrangling
R scripts for processing of GIANI data
goshtasbycalibration
iaclasslibrary
intro_to_image_analysis_workshop
jdll
The Java library to run Deep Learning models
kimmelnet
CNN to predict the age (hours post fertilisation) of zebrafish embryos
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