Name: Dinindu Senanayake
Type: User
Company: New Zealand eScience Infrastructure
Bio: Research Support Specialist in High Performance Computing (Bioinformatics/Computational Biology)
Location: Auckland, New Zealand
Dinindu Senanayake's Projects
A collection of scripts and notes related to genomics and bioinformatics
Repo for Introduction to HPC for Life Scientists course ran on 22/03/2021-24/03/2021
AcrFinder, a tool for automated identification of Acr-Aca loci
Open source code for AlphaFold.
Run Assembly statistics on a genome assembly (BUSCO and assemblyStats and new_Assemblathon.pl)
A novel genome assembly pipeline based on deep learning
Repository to supplement the medium article about TUI usage in bioinformatics
Login and troubleshooting instructions for NeSI Jupyter Services.
BITE: BioInformatics tools for everyone
Lessons on Chapel Programming Language
EasyBuild files, which are used on our local facilities
Cloud Genomics lesson
Usage of tools on Parallel Performance Analysis
Tutorial materials for DD2358
A Python package for microbiome sequencing analysis with QIIME 2
Rapid comparison and dereplication of genomes
A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
https://otagoedna.github.io/edna_workshop_june2021/
A feature engineering automation tool for learning data representations
Introduction to Fortran Programming
mkdocs test repository
instructions : setting up authentiation factor and login to Mahuika jupyter
Easy TOC creation for GitHub README.md