denisesl22 Goto Github PK

academy

Organized training examples for new WikiPathways authors

biomarkers

Biomarker collection.

bridgedb

The BridgeDb Library source code

bridgedb-matlab

bridgedb.github.io

Website of the BridgeDb project

bridgedbr

BIoconductor R package for BridgeDb

bridgedbtrials

coding-for-researchers

Resources for the Python workshop at IDS and UL, Maastricht University

create-bridgedb-diseases

Code to create local mapping files for disease IDs

create-bridgedb-interactions

create-bridgedb-metabolites

Create BridgeDb identity mapping files from HMDB, ChEBI, and Wikidata

create-bridgedb-secondary2primary

cyneo4j_dsmn

cytargetlinker.github.io

CyTargetLinker website and tutorials

cytoscape-app-samples

Cytoscape 3 sample code for App developers.

cytoscape-automation

Collection of scripts that include programmatic io and control of Cytoscape

cytoscape-tutorials

Collection of modular Cytoscape tutorials for online presentation using reveal.js

cytoscape-wikipathways-app

WikiPathways app for Cytoscape to open and access pathways from WikiPathways

data

Repository to mimic the old data/gene_database/ API

datasources

Repository with the BridgeDb data source.

evidenceontology

Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cite ECO. Visit our website for more project info.

findyourinteraction

PathVisio plugin to find relevant metabolic reactions from Rhea

fvtworkshop

Workshopmateriaal

gpml

Graphical Pathway Markup Language

gpml-rhea

Collect chemical reactions from a GPML file and look for matching Rhea equations.

groovy

Mirror of Apache Groovy

homology.mapper

GPML Homology Mapper

ibm_asi_workflow

example_CWL_workflow

iem-subdomain

imd-pathway-curation

WikiPathways Curation for just the IMD pathways