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beautiful-jekyll

✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com

bioconda-recipes

Conda recipes for the bioconda channel.

bioinformatics-workflows

minimal example implementations for bioinformatics workflow managers

bp-network

Multi-Classification on dataset of MNIST

ckg

Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge discovery making use of all the information contained in the graph

cptac-annotare

annotare for cptac raw data

data-folder

deep_learning_in_proteomics

A list of tools on proteomics using deep learning

deepnovo-dia

De novo peptide sequencing for DDA and DIA by deep learning

desc

Deep Embedding for Single-cell Clustering

dia_sum

Patrick's repository

diamond

A Multi-modal DIA Mass Spectrometry Data Processing Pipeline

diann

DIA-NN - a universal automated software suite for DIA proteomics data analysis.

example-plugin

A miniature example of a MultiQC plugin.

glycowork

Package for processing and analyzing glycans and their role in biology.

glycresoft

An LC-MS/MS glycan and glycopeptide search engine

glypy

Glycan Analysis and Glycoinformatics Library for Python

ibaqpy

Trying out some ibaq code with pyopenms

inttypes

Automatically exported from code.google.com/p/msinttypes

jsdrf

java library to validate SDRF file formats

lsd

:exclamation: This is a read-only mirror of the CRAN R package repository. LSD — Lots of Superior Depictions

machine-learning-with-python

Python code for common Machine Learning Algorithms

mad_decoy

Mad decoy is a decoy simulation tool to assess large-scale merge of q-values.

mathmodel

研究生数学建模，本科生数学建模、数学建模竞赛优秀论文，数学建模算法，LaTeX论文模板，算法思维导图，参考书籍，Matlab软件教程，PPT

metamorpheus

Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities

metaplastic-bc_pxd014414

Re-analysis of metaplastic breast cancer 27-sample TMT data from the PXD014414 archive.

modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

msnet

A large open benchmark dataset for computational proteomics

msstitch

MS proteomics post-processing utilities

multiomics-configs

Set of config files for species, taxonomies, etc