Name: Daniel
Type: User
Company: San Diego State University
Bio: Computational biology and bioinformatics PhD student in Dr. Rob Edwards Bioinformatics lab at San Diego State University.
Location: San Diego, California, USA
Blog: http://daniel-cuevas.com
Daniel's Projects
Bioinformatics-related scripts.
COBRApy is a package for constraints-based modeling of biological networks
Data visualization scripts
DataBase of Bacterial Phenotypes
Dot files used in *nix systems.
Repository for CAMI challenge files
This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach
The code used for identification of the hosts of different phages. This is the complete code base used in Edwards, McNair, Wellington-Oguri, and Dutilh, manuscript in preparation.
Phenotype microarray analysis scripts and other files
Phenotypic microarray assay analysis for 96-well multi-plate spectrophotometers.
Website implementation of PMAnalyzer.