Dave Bunten's Projects
A special GitHub repository for setting the Cytomining organization profile and default community health files.
An open-source handbook of applied guidance and tools for sustainable software development and maintenance.
A bookmarklet to help summarize textual web pages like news articles
API-based experiments for testing or proofs of concept.
Portable development environment testing for flexibility and reproducibility.
Better Scientific Software Homepage
An open-source application for biological image analysis
Python Jupyter notebooks for pre-production or one-off experiments.
coSMicQC is a software tool for single-cell quality control of morphology datasets.
csearch provides the ability to search mutliple sites at once using one query
Opinionated Prefect Tasks, used with the Prefect Core workflow system, for tasks such as ORADB and SFTP work
Cytomining organization GitHub Pages configuration.
Transform data for processing image-based profiling readouts with Pycytominer.
Benchmarks for CytoTable and related.
This is a general repo structure for "data endeavors" - tasks, initiatives, projects, or missions which revolve around data-specific goals.
An open source repository for shared Diversity, Equity, and Inclusion (DEI) educational resources.
Testing GitHub community health file interactions.
Demonstrating a DVC bug with pushing data to remotes in certain circumstances.
This repository helps demonstrate various Github Actions capabilities.
Demonstrating GitHub Actions variables and triggers
Demonstrating a possible bug with Jekyll Spaceship and Mermaid mindmap diagram rendering.
Demonstrating jupyter-book web accessibility issues
Demonstrating various potential bugs with Kuzu REL Table Groups
A demonstrational repository showing how Python Poetry dynamic versioning can be used to distribute Docker container images on Docker Hub for Python packages.
Demonstrating Python memory allocator reference counting and debug.
dnote enables on-the-fly scripting using variable input fields
Documentation for Cytomining Github organization to guide development and usage of related projects.
Simple task list controlled by hotkeys