cxrodgers Goto Github PK

adapters

Objects to manage physical adapters

analysis-tools

Code for analyzing data saved by the Open Ephys GUI

arducode

ardufsm

Run a finite state machine on an arduino and interact with it from Python

autolog

Automatically log the results of jobs initiated by cron

autopilot

Distributed behavioral experiments

autoscripts

behavenet

Behavioral and neural analysis toolbox based on https://papers.nips.cc/paper/9701-behavenet-nonlinear-embedding-and-bayesian-neural-decoding-of-behavioral-videos.pdf

bewatch

Tools for monitoring my behavioral data

deeplabcut

Markerless tracking of user-defined features with deep learning

discreteanalyze

Tools for analyzing discrete events like spiketrains or synchronizing events from multiple systems

django-nested-inline

Nested inline support for Django admin

ffmpeg-python

Python bindings for FFmpeg - with complex filtering support

gui

Software for electrophysiology data acquisition

ijroi

Reads ImageJ ROI files into numpy arrays.

jobtalk_beta

jtalk_beta

kkpandas

Read KlustaKwik or Klusters-formatted spike data into Python using pandas module

lfp

Methods for loading LFP from ns5 files and processing

machine_learning

machine learning projects, just to play around with

mcwatch

Extracting data from and interacting with django database mouse-cloud

mousecolony

Django project for record-keeping for a mouse colony

mousecolonychris

Version of MouseColony just for my experiments

my

Catchall module for stuff I'm working on that doesn't fit anywhere else

ns5_process

Scripts to convert ns5 files to OpenElectrophy db, then process

nwbdandidata2022

Example scripts for working with my NWB data on Dandi

object-tracking

pdf2pdf

does the magical pdf-to-pdf conversion popular in academic journal submission sites and does it faster than they do

pdfstamp

plugin-gui

Open Ephys GUI with plugin architecture