Comments (1)
@user-tq This package has no function to analyze protein level vaiation, you can try another package: biocommen hgvs , it could solve your problem
from hgvs.
Related Issues (20)
- No module read_transcripts in hgvs_utils HOT 10
- Unable to parse a HGVS variant in format that VEP accepts HOT 2
- Add NC_ALLELE parse
- Running UTA locally HOT 2
- how to create or find "genes.refGene" file for hg19 and hg38 HOT 11
- how to get coordinate of "AB026906.1:c.40_42del" by hgvs code
- Is there a way to use this to convert protein HGVS to genome space VCF coordinates?
- README.md (import hgvs error) HOT 1
- Syntax error when trying to parse valid R variant HOT 1
- Incorrect HGVS to VCF conversion for some genomic indels HOT 1
- pyhgvs normalize is right,but not give base number instead of base itself
- how to get pdot HOT 1
- dup longer than 100 bases converted back to delins (due to hardcoding of 100 in code) HOT 1
- Support inversions (inv)
- Python3 version HOT 1
- HGVS / genome coordinate conversion does not account for cDNA alignment gaps HOT 1
- Reference HGVS without reference base leads to wrong coordinates and reference allele
- Announcing cdot - a way to load lots of transcripts fast
- hgvs/pyhgvs/data/genes.refGen file HOT 2
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from hgvs.