Comments (2)
I would recommend bringing this up on Kilosort repo. On the SpikeInterface side we have seen multiple cases of Kilosort return spikes both before and after the recording time which can lead errors like this, but I'm not sure if this is the cause. You could try scur.remove_excessive_spikes(sorting, recording)
followed by export_to_phy and see if that fixes it. Otherwise this seems more like a problem with the KS output that they would need to know about.
Just wanted to point out I had a typo in the curation function. You need to give it the recording too for it to know which spikes are excessive :)
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Thanks @zm711, running remove_excessive_spikes did solve the problem! For me it was the spike times occuring after the recording period, as I had other sessions with negative spike times and those didn't seem to cause any issues.
I raised the issue on the Kilosort repo so they're aware of the problem. Thanks again!
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