Comments (2)
Hi Joe,
thanks for letting me know. This is indeed a puzzling bug. Unfortunately I don't have the capacity right now to search for the root cause. I will just leave this issue open for others who might encounter the same problem.
Best, Constantin
from ggsignif.
Posting a reprex for future reference:
library(plyr)
library(ggplot2)
library(ggsignif)
# generate some data
mtcars.meanMPG <-
ddply(
mtcars,
.(carb, am),
summarize,
meanMPG = round(mean(mpg), 3)
)
# works
ggplot(
data = mtcars.meanMPG,
aes(
x = factor(carb),
y = meanMPG,
fill = am,
group = am
)
) +
geom_bar(
stat = "identity",
position = position_dodge(preserve = "single")
) +
geom_signif(
annotation = "p = 0.01",
y_position = 29,
xmin = 1.7,
xmax = 2.3,
tip_length = c(0.01, 0.01)
)
# doesn't work
ggplot(
data = mtcars.meanMPG,
aes(
x = factor(carb, levels = unique(rev(mtcars.meanMPG$carb))),
y = meanMPG,
fill = am,
group = am
)
) +
geom_bar(
stat = "identity",
position = position_dodge(preserve = "single")
) +
geom_signif(
annotation = "p = 0.01",
y_position = 29,
xmin = 1.7,
xmax = 2.3,
tip_length = c(0.01, 0.01)
)
#> Warning: Use of `mtcars.meanMPG$carb` is discouraged. Use `carb` instead.
#> Warning: Use of `mtcars.meanMPG$carb` is discouraged. Use `carb` instead.
# doesn't work
mtcars.meanMPG$carb <-
factor(mtcars.meanMPG$carb, levels = unique(rev(mtcars.meanMPG$carb)))
ggplot(
data = mtcars.meanMPG,
aes(
x = carb,
y = meanMPG,
fill = am,
group = am
)
) +
geom_bar(
stat = "identity",
position = position_dodge(preserve = "single")
) +
geom_signif(
annotation = "p = 0.01",
y_position = 29,
xmin = 1.7,
xmax = 2.3,
tip_length = c(0.01, 0.01)
)
Created on 2021-01-12 by the reprex package (v0.3.0)
from ggsignif.
Related Issues (20)
- Figure out where the `WARNING`s and `NOTE`s in `R CMD check` are coming from HOT 1
- Manual vertical brackets do not work: "arguments imply differing number of rows" HOT 1
- Warning message: Ignoring unknown aesthetics: xmin, xmax, annotations, y_position HOT 3
- adding scale_y_log10 changes y-axis to a weird range
- geom_signif does not plot comparison on the facetted plot with free x scale HOT 2
- Where can we find the significance level in the ggplot object slots? HOT 1
- Rename default branch from `master` to `main` HOT 3
- CRAN release 0.6.4 HOT 3
- Correcting for multiple testing when using geom_signif HOT 5
- Feature request - add more distance between comparisons and data HOT 4
- geom_signif - all comparisons dissappear when one comparison has missings HOT 2
- Significance stars are misaligned when using "NS" as well
- ggsignif results don't match with anova significance HOT 1
- Use cross symbol when p <.10?
- what are * , ** , *** correspond if specific values by user is not given? HOT 1
- How do I hide the no significant (NS) comparisons?
- Adding significance bar on coupled boxplots
- FDR warning HOT 1
- Show exact p value in comparisons HOT 3
- ggsignif facetting issue - Missing significance labels in certain facets
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from ggsignif.