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abtem

ab initio Transmission Electron Microscopy

autolamella

autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.

autoliftout

autoliftout is a python package for automated liftout of cryo-lamella

coherentxrayimaging

Phase retrieval algorithms

edtools

Collection of tools for automated processing and clustering of electron diffraction data

eels-analysis

A Nion Swift package for doing EELS analysis.

epie_recon_simulation

Phase retrieval with ePIE algortihm [Rodenburg, John M., and Helen ML Faulkner. "A phase retrieval algorithm for shifting illumination." Applied physics letters 85.20 (2004): 4795-4797]

fibsem

A universal API for FIBSEM control

fold_slice

Electron/X-ray ptychography and tomography/laminography

fourdexplorer

4DExplorer: Four dimensional scanning transmission electron microscopy (4D-STEM) imaging, reconstruction and data analysis.

hyperspy

Multidimensional data analysis

hyperspy_tutorial

Files for external HyperSpy tutorial sessions hosted by NIST

instamatic

Python program for automated electron diffraction data collection

insteadmatic

A DigitalMicrograph script to collect 3D electron diffraction data with continuous rotation

iris-ued

Ultrafast electron scattering data exploration

kramers-kronig

Calculate the real part of the dielectric function from the imaginary part

learn-python3

Learn Python 3 Sample Code

learning-python-2896241

This repository is for the Linkedin Learning course: Learning Python

montage

Image Mosaics for Astronomers

openncem

A collection of packages and tools for electron microscopy data analysis supported by the National Center for Electron Microscopy facility of the Molecular Foundry

process_eels_-python-

Process EELS systematically: align, normalize, PCA, LLR_denoise, plot, find peak.

ptychography

Code repository for Ptychography 4.0 project.

ptychopy

High performance ptychography reconstruction python package running on GPU

py4dstem

py4dstem_tutorials

Sample code for py4DSTEM

py_multislice

A GPU accelerated Python multislice slice code

pyfai

Fast Azimuthal Integration in Python

pylorentz

Python code for simulating and reconstructing Lorentz transmission electron microscopy (LTEM) data.

pythondemo

My Python Demo

pyxem

An open-source Python library for multi-dimensional diffraction microscopy.