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Name: Collin Joyce, Ph.D.
Type: User
Company: Scripps Research
Bio: Immunology | NGS | Data
Location: La Jolla
Name: Collin Joyce, Ph.D.
Type: User
Company: Scripps Research
Bio: Immunology | NGS | Data
Location: La Jolla
VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
Helpful Scripts for Antibody NGS Data Processing
Bulk antibody sequence preprocessing, annotation with abstar, import to MongoDB
10x Genomics Single Cell 3' Gene Expression and VDJ Assembly
Code and data used in The Great Repertoire Project v2
Code and data used in the OmniRat paper
B- and T-cell receptor sequence annotation, simulation, clonal family, and germline inference
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
UMI Barcoded Illumina 2x250 BCR mRNA Preprocessing with Presto
RNA velocity estimation in Python
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.