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cancerseekv1

R code for the algorithm used in Cohen et al. Science 2018 "Detection and localization of surgically resectable cancers with a multi-analyte blood test", Science 2018, 359(6378):926-930.

conta

Conta is an R package to detect cross contamination and source of contamination

coursera-statistics-one--r

Statistics One is designed to be a comprehensive yet friendly introduction to fundamental concepts in statistics. Comprehensive means that this course provides a solid foundation for students planning to pursue more advanced courses in statistics. Friendly means exactly that. The course assumes very little background knowledge in statistics and introduces new concepts with several fun and easy to understand examples. This course is, quite literally, for everyone. If you think you can't learn statistics, this course is for you. If you had a statistics course before but feel like you need a refresher, this course is for you. Even if you are a relatively advanced researcher or analyst, this course provides a foundation and a context that helps to put one’s work into perspective. Statistics One also provides an introduction to the R programming language. All the examples and assignments will involve writing code in R and interpreting R output. R software is free! What this means is you can download R, take this course, and start programming in R after just a few lectures. That said, this course is not a comprehensive guide to R or to programming in general.

deep-learning-with-python-notebooks

Jupyter notebooks for the code samples of the book "Deep Learning with Python"

deepcat

Deep Learning Method to Identify Cancer Associated TCRs

generative_agents

Generative Agents: Interactive Simulacra of Human Behavior

go-common

哔哩哔哩 bilibili 网站后台工程 源码

handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

machine-learning-for-trading

Code for Machine Learning for Algorithmic Trading, 2nd edition.

mining-the-social-web-2nd-edition

The official online compendium for Mining the Social Web, 2nd Edition (O'Reilly, 2013)

mutalyzer

HGVS variant nomenclature checker

probabilistic-programming-and-bayesian-methods-for-hackers

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

pysam

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

radiogkb

Radiation Genomics Knowledgebase

rmrb

人民日报（1946-2003)

safeseqs

Python pipeline for analysis of SafeSeqS DNA sequencing data.

tensorflow-tutorials

TensorFlow Tutorials with YouTube Videos

thinkbayes

Code repository for Think Bayes.

utils