Comments (9)
cbarcl01
commented on August 28, 2024
| Organism | ID |
|---|---|
| Aeromonas rivipollensis | NCBITaxon:948519 |
| Aeromonas salmonicida | NCBITaxon:645 |
| Citrobacter gillenii | NCBITaxon:67828 |
| Clostridium sporogenes | NCBITaxon:1509 |
| Exiguobacterium | NCBITaxon:33986 |
| Exiguobacterium oxidotolerans | NCBITaxon:223958 |
| Exiguobacterium sp. | NCBITaxon:44751 |
| Kluyvera | NCBITaxon:579 |
| Kluyvera intermedia | NCBITaxon:61648 |
| Photobacterium | NCBITaxon:657 |
| Photobacterium sp. | NCBITaxon:660 |
| Pseudoalteromonas | NCBITaxon:53246 |
| Pseudoalteromonas tetraodonis | NCBITaxon:43659 |
| Psychrobacter | NCBITaxon:497 |
| Psychrobacter faecalis | NCBITaxon:180588 |
| Psychrobacter sp. | NCBITaxon:56811 |
| Shewanella | NCBITaxon:22 |
| Shewanella pealeana | NCBITaxon:70864 |
| Shewanella putrefaciens | NCBITaxon:24 |
| Shewanella sp. | NCBITaxon:50422 |
from grdi_amr_one_health.
cbarcl01
commented on August 28, 2024
| collection_method | ID |
|---|---|
| Water filtration | GENEPIO:0100931 |
| Scooping | GENEPIO:0100932 |
| Sediment collection | GENEPIO:0100933 |
| Soil coring | GENEPIO:0100934 |
from grdi_amr_one_health.
cbarcl01
commented on August 28, 2024
| collection_device | ID | Definition |
|---|---|---|
| Box corer | GENEPIO:0100928 | A specimen collection device that is used to collect soft sediments in lakes or oceans. |
| PONAR grab sampler | GENEPIO:0100929 | A specimen collection device that is used to collect sediment samples from hard bottoms. |
| Soil sample probe | GENEPIO:0100930 | A specimen collection device that is used to collect a soil sample from the ground. |
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cbarcl01
commented on August 28, 2024
| specimen_processing | ID |
|---|---|
| Isolated from single source | GENEPIO:0100926 |
from grdi_amr_one_health.
cbarcl01
commented on August 28, 2024
| environmental_site | ID |
|---|---|
| Breeding ground | ENVO:03501441 |
| Beef farm | ENVO:03501443 |
| Beef cattle feedlot | ENVO:03501444 |
| Benthic zone | ENVO:03501440 |
| Roost (bird) | ENVO:03501439 |
| Slough | ENVO:03501438 |
| Urban area | ENVO:03501437 |
from grdi_amr_one_health.
cbarcl01
commented on August 28, 2024
| environmental_material | ID | Definition |
|---|---|---|
| Fecal slurry | ENVO:03501436 | |
| Influent | ENVO:03501442 | Contaminated or untreated water which is flowing into a wastewater treatment plant for processing. |
from grdi_amr_one_health.
cbarcl01
commented on August 28, 2024
| body_product | ID | Definition |
|---|---|---|
| Digestive tract substance | GENEPIO:0100898 | Undigested food material, microbiota, and other materials found in the digestive tract. |
| Caecal content | GENEPIO:0100899 | Undigested food material, microbiota, and other materials found in the cecum |
| Intestinal content | GENEPIO:0100900 | Undigested food material, microbiota, and other materials found in the intestine |
| Stomach content | GENEPIO:0100901 | Undigested food material, microbiota, and other materials found in the stomach |
| Fecal composite | GENEPIO:0004512 | |
| Feces (fresh) | GENEPIO:0004513 | |
| Feces (environmental) | GENEPIO:0004514 |
from grdi_amr_one_health.
cbarcl01
commented on August 28, 2024
| anatomical_part | ID |
|---|---|
| Mantle (bird) | GENEPIO:0100927 |
from grdi_amr_one_health.
cbarcl01
commented on August 28, 2024
Newest release v.8.9.8
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Related Issues (20)
- NTR: [midwest term] HOT 1
- Pick-list for field `food_packaging` in the Excel template is displaying the wrong values. HOT 4
- NTR: Shrimp HOT 1
- NTR: Scallops HOT 2
- NTR: [Christine Liu's from DFO template with new terms] HOT 1
- NTR: Weep fluid collection (pouring) HOT 1
- 10.0.0 - release note tracking HOT 10
- 10.0.0 - repository release
- 11.1.1 - release note tracking HOT 6
- 11.1.1 - repository release HOT 1
- NTR: Squid HOT 2
- NTR: Mussels HOT 1
- NTR: Vibrio parahaemolyticus HOT 3
- 12.2.2 - release note tracking HOT 11
- 12.2.2 - repository release HOT 1
- NFR: specimen processing details HOT 2
- NTR: Wastewater treatment plant HOT 2
- NTR: drainage ditch HOT 2
- 13.3.3 - release note tracking HOT 7
- NTR: grit removal HOT 2
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