Name: Chris Creevey
Type: User
Company: Queen's University Belfast
Bio: Computational Biologist. Interested in Ecology, Evolution, microbial communities and phylogenetics.
Twitter: hairy_llama
Location: United Kingdom
Blog: http://www.creeveylab.org
Chris Creevey's Projects
A simple piece of code that generates all possible unrooted trees in tree-space, given a certain number of taxa
Tool to implement a j48 decision tree from WEKA
A tool for concatenating multiple fasta alignments for supermatrix phylogenetic analyses
Config files for my GitHub profile.
Check trees for compatibility with defined groupings in unrooted trees - "The incontestable clan test"
Clann: constructing consensus trees and supertrees from multiple source trees
Fast heuristic methods of detecting adaptive evolution in protein-coding genes.
A tool to generate a phylogenetic representation of a LIN barcdoe taxonomy
Machete: Automated Likelihood decay indices and Maximum likelihood phlyogeny construction with PAUP*
A tool for identifying gene famililes from very large datasets.
tools for parsing RDP taxonomy output in JSON format for visualisation
An experimental tool to strip alignments by infomrativeness, conservation, etc..
Rapid calculation of pathlength distances between taxa on phlyogenetic trees