chenxi1201 Goto Github PK

agora

Algorithm For Gene Order Reconstruction in Ancestors

alphapulldown

amphioxusgenome

artdeco

autocard

浙江大学自动健康打卡

awesome-bioinformatics-cn

生物信息学软件，资源和工具库的精选列表

bopsexchr

Analyses of sex chromosome evolution in songbirds

cactus

Official home of genome aligner based upon notion of Cactus graphs

centromere_synteny_project

How to identify genome-wide synteny with LASTZ alignment

deephgt

disco

Decomposition Into Single-COpy gene trees (DISCO) is a method for decomposing multi-copy gene-family trees while attempting to preserve orthologs and discard paralogs.

emu

ercnet

findzx

gcnframe

This is a python package for genomics study with a GCN framework.

genespace

ggisy

Genome-Genome circle synteny

jcvi

Python library to facilitate genome assembly, annotation, and comparative genomics

mcscan

Command-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format

mcscanx

MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!

mcscanx-downstream

scripts to parse and analyse MCScanX collinearity output

monkparakeet

chromosome assembly and neo-sex chromosome of monk parakeet

muntjac_code

parsing-repeatmasker-outputs

Few scripts facilitating the extraction of info from Repeat Masker .out files

proteny

A tool to analyze synteny at the protein level.

pyfeat

A Python-based Effective Feature Generation Tool from DNA, RNA, and Protein Sequences

readon

rectchr

Multi-level visualization of genomic statistical variables on rectangular chromosomes

rthealthytissues

readthrough in healthy tissues

satc

Sex assignment through coverage